Projects per year
Personal profile
University web profile link
Research interests
Dr Lewis C. E. Mason is primarily interested in research regarding the evolution and spread of antimicrobial resistant, sexually transmissible bacterial pathogens. He employs both wet-laboratory experimentation and computational bioinformatics (microbial genomics, genomic epidemiology, and phylogenetics) in his research.
He focusses on both sexually transmissible enteric bacterial pathogens (Shigella spp., Campylobacter spp., Salmonella spp., several pathotypes of Escherichia coli) and traditionally-considered sexually transmissible pathogens (Neisseria gonorrhoeae, Treponema pallidum, Chlamydia trachomatis, etc.). Infectious diseases of particular interest to him are shigellosis, campylobacteriosis, salmonellosis, syphilis, gonorrhoea, chlamydia, among others.
Foodborne and waterborne antimicrobial resistant bacterial pathogens of interest to him also include Klebsiella pneumoniae, Pseudomonas aeruginosa, Listeria monocytogenes, and Helicobacter pylori.
His expertise and research interests also span across several One Health topics, particularly in regards to bacterial antimicrobial resistance (AMR) and interactions among the environment, food, water, animals, and humans.
Commonly used techniques in his research group include phylogenetic tree construction, antimicrobial susceptibility testing (AST), microbial genomics, long-read and short-read sequencing, microbial genome assembly, antimicrobial resistance gene presence/absence analyses, AMR and virulence plasmid dynamic analyses, among others.
He values both national and international collaborative activities across the entirety of bacteriology research. He ensures that his research is directly beneficial for patient and public health by involving colleagues with clinical expertise in his research, and the views of patients and the public via patient and public involvement and engagement (PPIE) activities, from the conceptualisation stage of research onwards through to the output stage.
He is currently accepting correspondence from prospective MSc(Res) and PhD students, prospective collaborators, and media representatives ([email protected]).
Related documents
Education/Academic qualification
Recognised by Advance HE as an Associate Fellow against Descriptor 1 of the UKPSF
Health, Bachelor, BSc (Hons) Biomedical Science [Medical Microbiology Specialism], University of Bradford
Health, Master, MSc Infection, Immunity, and Human Disease, University of Leeds
Health, Doctorate, PhD Medical Microbiology, University of Liverpool
Keywords
- Q Science (General)
- Bioinformatics
- Microbial Evolution
- Microbiology
- Genomics
- Phylogenetics
- Coding (Bash, R, Python)
- Epidemiology
- Bacteriology
- Infectious Disease
- Microbial genomics
- Sequencing
- QR180 Immunology
- Microbial Genomics
- Vaccines
- Genomic Epidemiology
- Bacteriology
- Shigella spp.
- Escherichia coli
- Campylobacter spp.
- Salmonella spp.
- Chlamydia
- Gonorrhoea
- Syphilis
- Mycoplasma genitalium
- Klebsiella spp.
- Pseudomonas spp.
- Antimicrobial Resistance
- AMR
- Antibiotics
- Antimicrobials
- Helicobacter pylori
- Neisseria gonorrhoeae
- Pseudomonas aeruginosa
- Listeria monocytogenes
- One Health
- Antimicrobial susceptibility testing (AST)
- RA0421 Public health. Hygiene. Preventive Medicine
- Antimicrobial Resistance
- AMR
- Antibiotic Resistance
- Sexually Transmissible Infections (STIs)
- Sexually Transmitted Infections (STIs)
- Sexually Transmitted Diseases (STDs)
- Public Health Interventions
- Public Health
- Epidemiology
- Gay, bisexual, and other men who have sex with men
- GBMSM
- MSM
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Collaborations and top research areas from the last five years
Projects
- 3 Finished
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Antimicrobial resistance plasmid characterisation in enteropathogenic Escherichia coli (EPEC)
Mason, L. (Researcher) & Fletcher, J. (PI)
1/09/18 → 1/02/19
Project: Research
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Sequence analyses of the proteobacterial antimicrobial compound efflux (PACE) family of antimicrobial resistance proteins
Mason, L. (Researcher) & Henderson, P. (PI)
1/01/20 → 1/08/20
Project: Research
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The genomic epidemiology of antimicrobial resistant sexually transmissible shigellosis
Mason, L. (Researcher), Baker, K. S. (PI) & Jenkins, C. (PI)
1/12/20 → 1/12/24
Project: Research
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Leveraging traveller genomics for LMIC diarrhoeal disease management
Baker, K. S., Ingle, D. J., Irulappan, M., Mason, L. C. E., Veeravagarahvan, B., Jenkins, C., Chattaway, M. & Johnson, S. B., 7 Sept 2026, (E-pub ahead of print) In: Trends in Microbiology.Research output: Contribution to journal › Review article › peer-review
Open Access -
Giardiasis cases are rising in England: should we be worried?
Mason, L., 2 Sept 2026, The Conversation.Research output: Contribution to specialist publication › Article
Open Access -
What happens to your body when you eat more pulses? Five effects you need to know
Mason, L., 26 Aug 2026, The Conversation.Research output: Contribution to specialist publication › Article
Open Access -
Some animals catch cancer from others in their species: here’s why humans aren’t one of them
Mason, L., 27 Jul 2026, The Conversation.Research output: Contribution to specialist publication › Article
Open Access -
The spread of sexually transmissible drug-resistant shigellosis in England: a genomic epidemiology study
Marshall, J. E., Lefrancq, N., Mason, L. C. E., Jawed, F., Tam, Y. L., Jenkins, C., Salje, H. & Baker, K. S., 8 Jul 2026, (E-pub ahead of print) In: The Lancet Infectious Diseases.Research output: Contribution to journal › Article › peer-review
Open Access
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Microbiology Society (External organisation)
Mason, L. (Member)
2016 → …Activity: Membership › Professional memberships
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Institute of Biomedical Science (External organisation)
Mason, L. (Member)
2026 → …Activity: Membership › Professional memberships
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British Society for Antimicrobial Chemotherapy (External organisation)
Mason, L. (Member)
2020 → …Activity: Membership › Professional memberships
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British Association for Sexual Health and HIV (External organisation)
Mason, L. (Member)
2020 → …Activity: Membership › Professional memberships
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Applied Microbiology International (External organisation)
Mason, L. (Member)
2020 → …Activity: Membership › Professional memberships
Prizes
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'Best Oral Presentation' Prize - NIHR HPRU GI Annual Conference 2024
Mason, L. (Recipient), 1 Mar 2024
Prize
Press/Media
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The global rise of a drug-resistant strain of Shigella that is spread through sex
12/05/23
1 item of Media coverage
Press/Media
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Sexually transmitted, drug-resistant Shigella spreading rapidly across England, study reveals
8/07/26 → 27/07/26
7 items of Media coverage
Press/Media