GWAS on longitudinal growth traits reveals different genetic factors influencing infant, child, and adult BMI

Ville Karhunen, Ulla Sovio, Doug Speed, Lachlan J. M. Coin, Marie Loh, Sheila J. Barton, Lawrence J. Beilin, Claudia Flexeder, Stephen Franks, Timothy M. Frayling, Rachel M. Freathy, Paul Elliott, Asa K. Hedman, Esa Laara, Holger Prokisch, Harald Grallert, Timo A. Lakka, Karl-Heinz Herzig, George Davey Smith, Paul O'ReillyJanine F. Felix, Jessica L. Buxton, Alexandra I. F. Blakemore, Ken K. Ong, Vincent W. V. Jaddoe, Struan F. A. Grant, Sylvain Sebert, Mark I. McCarthy, Marjo-Riitta Jarvelin, Elisabeth Widen, Hakon Hakonarson, Andrew T. Hattersley, Debbie A. Lawlor, Mads Melbye, Tarunveer S. Ahluwalia, Shikta Das, H. Rob Taal, Nicole M. Warrington, Alexandra M. Lewin, Marika Kaakinen, Hans Bisgaard, Klaus Bonnelykke, Diana L. Cousminer, Elisabeth Thiering, Nicholas J. Timpson, Tom A. Bond, Estelle Lowry, Rohia Alili, Ida J. Hatoum, Katharina Schramm, Rufus Cartwright, Alina Rodriguez, Marco Banterle, Marcella Marinelli, Iona Y. Millwood, Lyle J. Palmer, Craig E. Pennell, John R. Perry, Susan M. Ring, Markku J. Savolainen, Fernando Rivadeneira, Marie Standl, Jordi Sunyer, Carla M. T. Tiesler, Andre G. Uitterlinden, William Schierding, Justin M. O'Sullivan, Inga Prokopenko, Marie-Aline Charles, Vincenzo Salerno, Karine Clement, Annique A. J. Claringbould, Cornelia M. van Duijn, Elena Moltchanova, Johan G. Eriksson, Cathy Elks, Bjarke Feenstra, Joachim Heinrich, Barbara Heude, John W. Holloway, Albert Hofman, Jonathan P. Bradfield, Frank Geller, Elina Hypponen, Hazel Inskip, Lee M. Kaplan, Christopher D. Brown, Xavier Estivill, Virpi Lindi, Alexessander Couto Alves, N. Maneka G. De Silva

    Research output: Contribution to journalArticlepeer-review

    Abstract

    Early childhood growth patterns are associated with adult health, yet the genetic factors and the developmental stages involved are not fully understood. Here, we combine genome-wide association studies with modeling of longitudinal growth traits to study the genetics of infant and child growth, followed by functional, pathway, genetic correlation, risk score, and colocalization analyses to determine how developmental timings, molecular pathways, and genetic determinants of these traits overlap with those of adult health. We found a robust overlap between the genetics of child and adult body mass index (BMI), with variants associated with adult BMI acting as early as 4 to 6 years old. However, we demonstrated a completely distinct genetic makeup for peak BMI during infancy, influenced by variation at the LEPR/LEPROT locus. These findings suggest that different genetic factors control infant and child BMI. In light of the obesity epidemic, these findings are important to inform the timing and targets of prevention strategies.
    Original languageEnglish
    Article numbereaaw3095
    JournalScience Advances
    Volume5
    Issue number9
    Early online date4 Sept 2019
    DOIs
    Publication statusPublished - 4 Sept 2019

    Bibliographical note

    Note: This work was supported by: UK Medical
    Research Council and Wellcome Trust (grant reference 102215/2/13/2); NIH grant R01
    HD056465; Danish National Research Foundation; NIH Genes, Environment and Health
    Initiative (GEI; U01HG004423); NIH GEI (U01HG004438); Lundbeck Foundation (R19-A2059);
    Danish Medical Research Council (09-065592); French Ministry of Research; INSERM; South
    West NHS Research and Development; Exeter NHS Research and Development; Netherlands
    Organization for Health Research and Development (VIDI 016. 136. 361); European Union's
    Horizon 2020 research and innovation programme under grant agreement nos. 633595
    (DynaHEALTH), 733206 (LIFECYCLE), and 721567 (CAPICE); European Research Council (ERC
    consolidator grant, ERC-2014-CoG-648916); Academy of Finland (project grants 209072 and
    129255); British Heart Foundation and Academy of Finland (grants 134839 and 129287);
    National Public Health Institute, Helsinki, Finland; World Cancer Research Fund (WCRF UK) and
    World Cancer Research Fund International (2017/1641); Wellcome Trust (WT205915);
    European Commission under the Marie Curie Intra-European Fellowship (project MARVEL,
    PIEF-GA-2013-626461); Instituto de Salud Carlos III (CB06/02/0041, FIS PI041436, PI081151,
    PI041705, and PS09/00432 and FIS-FEDER 03/1615, 04/1509, 04/1112, 04/1931, 05/1079,
    05/1052, 06/1213, 07/0314, and 09/02647); Spanish Ministry of Science and Innovation
    (SAF2008-00357); European Commission (ENGAGE project and grant agreement
    HEALTH-F4-2007-201413); Fundació La Marató de TV3; Generalitat de Catalunya-CIRIT
    1999SGR 00241; Federal Ministry for Environment (IUF Düsseldorf, FKZ 20462296); National
    Health and Medical Research Council of Australia (grant IDs 403981 and 003209); Canadian
    Institutes of Health Research (grant ID MOP-82893); Royal Society of New Zealand Marsden
    Fund (grant 16-UOO-072); Academy of Finland (project grants 104781, 120315, 129269,
    1114194, Center of Excellence in Complex Disease Genetics, and SALVE); University Hospital
    Oulu; Biocenter; University of Oulu, Finland (75617); European Commission (EURO-BLCS,
    Framework 5 award QLG1-CT-2000-01643); NHLBI grant 5R01HL087679-02 through the
    STAMPEED program (1RL1MH083268-01); NIH/NIMH (5R01MH63706:02); Medical Research
    Council, United Kingdom (G0500539 and G0600705, PrevMetSyn/SALVE, MR/M013138,
    G0802782); Wellcome Trust (project grant GR069224); and EU Framework Programme 7
    EurHEALTHAgeing 277849.

    Keywords

    • Biological sciences

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